Human (GRCh38.p14)
Description

reticulophagy regulator 1 [Source:HGNC Symbol;Acc:HGNC:25964]

Gene Synonyms

FAM134B, FLJ20152, JK1

Location
About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 14110 variant alleles and maps to 463 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000306320.10RETREG1-2013208497aaENSP00000304642.9
 
Protein coding
CCDS43304Q9H6L5-1 NM_001034850.3MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000682229.1RETREG1-2093346549aaENSP00000507342.1
 
Protein coding
A0A804HJ37 -GENCODE basic
ENST00000682564.1RETREG1-2103184496aaENSP00000508099.1
 
Protein coding
A0A804HKW5 -GENCODE basic
ENST00000399793.6RETREG1-2023145356aaENSP00000382691.2
 
Protein coding
CCDS43305Q9H6L5-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000682142.1RETREG1-2083037396aaENSP00000506804.1
 
Protein coding
A0A804HHX5 -GENCODE basic
ENST00000684521.1RETREG1-2232020451aaENSP00000507521.1
 
Protein coding
A0A804HJI9 -GENCODE basic
ENST00000683414.1RETREG1-2181831322aaENSP00000508335.1
 
Protein coding
H0Y9U4 -GENCODE basic
ENST00000682628.1RETREG1-2111647322aaENSP00000507536.1
 
Protein coding
H0Y9U4 -GENCODE basic
ENST00000684456.1RETREG1-2221639141aaENSP00000508060.1
 
Protein coding
A0A804HKT1 -GENCODE basic
ENST00000683539.1RETREG1-2201196322aaENSP00000507466.1
 
Protein coding
H0Y9U4 -GENCODE basic
ENST00000682033.1RETREG1-20753644aaENSP00000507240.1
 
Protein coding
A0A804HIV2 -CDS 5' incomplete
ENST00000683527.1RETREG1-2193170226aaENSP00000507253.1
 
Nonsense mediated decay
A0A804HIW5 --
ENST00000683130.1RETREG1-216169467aaENSP00000507709.1
 
Nonsense mediated decay
A0A804HJZ6 --
ENST00000510362.6RETREG1-2061531322aaENSP00000425089.2
 
Nonsense mediated decay
H0Y9U4 -TSL:1
ENST00000682808.1RETREG1-2123210No protein-
 
Protein coding CDS not defined
---
ENST00000509977.2RETREG1-2051676No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000509048.2RETREG1-2041365No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000683045.1RETREG1-2157708No protein-
 
Retained intron
---
ENST00000684695.1RETREG1-2245434No protein-
 
Retained intron
---
ENST00000682982.1RETREG1-2143938No protein-
 
Retained intron
---
ENST00000683169.1RETREG1-2173663No protein-
 
Retained intron
---
ENST00000683973.1RETREG1-2213120No protein-
 
Retained intron
---
ENST00000682828.1RETREG1-213904No protein-
 
Retained intron
---
ENST00000506441.1RETREG1-203585No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,145 bps, Translation length: 356 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H6L5

CCDS

This transcript is a member of the Human CCDS set: CCDS43305

Transcript Support Level (TSL)

TSL:1

Version

ENST00000399793.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.