Human (GRCh38.p14)
Description

homeobox containing 1 [Source:HGNC Symbol;Acc:HGNC:26137]

Gene Synonyms

FLJ21616, HNF1LA, HOT1, PBHNF

Location
About this transcript

This transcript has 11 exons, is annotated with 23 domains and features, is associated with 65362 variant alleles and maps to 618 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000287701.15HMBOX1-2013711420aaENSP00000287701.10
 
Protein coding
CCDS6071Q6NT76-1 NM_001135726.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000397358.7HMBOX1-2034082420aaENSP00000380516.3
 
Protein coding
CCDS6071Q6NT76-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000558662.5HMBOX1-2121765405aaENSP00000453211.1
 
Protein coding
CCDS83274Q6NT76-2 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000524238.3HMBOX1-2111731443aaENSP00000430110.1
 
Protein coding
CCDS83273Q6NT76-5 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000523613.5HMBOX1-2101730396aaENSP00000452827.1
 
Protein coding
H0YKJ1 -GENCODE basicTSL:1
ENST00000355231.9HMBOX1-2021694386aaENSP00000475196.1
 
Protein coding
E5RGZ2 -GENCODE basicTSL:5
ENST00000519047.5HMBOX1-2061551386aaENSP00000430059.1
 
Protein coding
E5RGZ2 -GENCODE basicTSL:5
ENST00000560599.5HMBOX1-2151426364aaENSP00000453185.1
 
Protein coding
H0YLF2 -TSL:5CDS 3' incomplete
ENST00000519662.5HMBOX1-207811118aaENSP00000429767.1
 
Protein coding
E5RHH9 -TSL:4CDS 3' incomplete
ENST00000521516.5HMBOX1-2082216304aaENSP00000430238.1
 
Nonsense mediated decay
Q6NT76-4 -TSL:2
ENST00000522468.1HMBOX1-20981745aaENSP00000429854.1
 
Nonsense mediated decay
H0YBM8 -TSL:3CDS 5' incomplete
ENST00000517386.1HMBOX1-204761No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000560269.1HMBOX1-213569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000518080.2HMBOX1-205559No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000561377.1HMBOX1-216307No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000560357.5HMBOX1-214979No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 9, Transcript length: 4,082 bps, Translation length: 420 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NT76

CCDS

This transcript is a member of the Human CCDS set: CCDS6071

Transcript Support Level (TSL)

TSL:1

Version

ENST00000397358.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.