Human (GRCh38.p14)
Description

vacuolar protein sorting 13 homolog C [Source:HGNC Symbol;Acc:HGNC:23594]

Gene Synonyms

BLTP5C, FLJ10381, FLJ20136, KIAA1421

Location
About this transcript

This transcript has 80 exons, is annotated with 23 domains and features, is associated with 92644 variant alleles and maps to 1561 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000644861.2VPS13C-209134033753aaENSP00000493560.2
 
Protein coding
CCDS32257Q709C8-1 NM_020821.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3
ENST00000645819.1VPS13C-210145783628aaENSP00000496179.1
 
Protein coding
CCDS45272Q709C8-2 -GENCODE basicAPPRIS ALT2
ENST00000249837.7VPS13C-201133003710aaENSP00000249837.3
 
Protein coding
CCDS10180Q709C8-3 -GENCODE basicTSL:1
ENST00000395898.3VPS13C-202110123585aaENSP00000379235.3
 
Protein coding
CCDS58367Q709C8-4 -GENCODE basicTSL:1
ENST00000649766.1VPS13C-21165731167aaENSP00000498208.1
 
Protein coding
A0A3B3IU50 -CDS 5' incomplete
ENST00000650094.1VPS13C-2128032505aaENSP00000497607.1
 
Nonsense mediated decay
A0A3B3IT88 -CDS 5' incomplete
ENST00000558919.1VPS13C-205566No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000558088.1VPS13C-203549No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000560637.5VPS13C-2073684No protein-
 
Retained intron
--TSL:1
ENST00000558338.1VPS13C-2041863No protein-
 
Retained intron
--TSL:2
ENST00000559119.1VPS13C-206738No protein-
 
Retained intron
--TSL:2
ENST00000561258.1VPS13C-208614No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 80, Coding exons: 80, Transcript length: 11,012 bps, Translation length: 3,585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q709C8

CCDS

This transcript is a member of the Human CCDS set: CCDS58367

Transcript Support Level (TSL)

TSL:1

Version

ENST00000395898.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.