Transcript: ENST00000395731.5 HTR5A-AS1-201

Description

HTR5A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48956]

Gene Synonyms

HTR5AOS

Location

About this transcript

This transcript has 2 exons, is associated with 2608 variant alleles and maps to 143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000671665.1	HTR5A-AS1-204	3629	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000655797.1	HTR5A-AS1-203	3009	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395731.5	HTR5A-AS1-201	2703	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000493904.3	HTR5A-AS1-202	1178	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,703 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000395731.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.