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Human (GRCh38.p14)
Description

treacle ribosome biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:11654]

Gene Synonyms

TCS, TREACLE

About this transcript

This transcript has 18 exons, is annotated with 50 domains and features and maps to 504 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000643257.2TCOF1-21650261489aaENSP00000493815.1
 
Protein coding
CCDS93805Q13428-3 NM_001371623.1MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE Basic
ENST00000930571.1TCOF1-25252171558aaENSP00000600630.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000930555.1TCOF1-23651351525aaENSP00000600614.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930554.1TCOF1-23551331524aaENSP00000600613.1
 
Protein coding
--GENCODE Basic
ENST00000930560.1TCOF1-24151331525aaENSP00000600619.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000377797.7TCOF1-20250951488aaENSP00000367028.4
 
Protein coding
CCDS54936Q13428-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:5
ENST00000930565.1TCOF1-24650941514aaENSP00000600624.1
 
Protein coding
--GENCODE Basic
ENST00000930570.1TCOF1-25150711509aaENSP00000600629.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930540.1TCOF1-22150611429aaENSP00000600599.1
 
Protein coding
--GENCODE Basic
ENST00000930544.1TCOF1-22550371487aaENSP00000600603.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000930586.1TCOF1-26750271508aaENSP00000600645.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000930558.1TCOF1-23950231488aaENSP00000600617.1
 
Protein coding
--GENCODE Basic
ENST00000930556.1TCOF1-23750211487aaENSP00000600615.1
 
Protein coding
--GENCODE Basic
ENST00000930557.1TCOF1-23850211487aaENSP00000600616.1
 
Protein coding
--GENCODE Basic
ENST00000930575.1TCOF1-25649971487aaENSP00000600634.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930562.1TCOF1-24349671470aaENSP00000600621.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930548.1TCOF1-22949661465aaENSP00000600607.1
 
Protein coding
--GENCODE Basic
ENST00000930576.1TCOF1-25749511472aaENSP00000600635.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930567.1TCOF1-24849451465aaENSP00000600626.1
 
Protein coding
--GENCODE Basic
ENST00000930573.1TCOF1-25449391466aaENSP00000600632.1
 
Protein coding
--GENCODE Basic
ENST00000930543.1TCOF1-22449361449aaENSP00000600602.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000930547.1TCOF1-22849161448aaENSP00000600606.1
 
Protein coding
--GENCODE Basic
ENST00000930553.1TCOF1-23449151450aaENSP00000600612.1
 
Protein coding
--GENCODE Basic
ENST00000930561.1TCOF1-24248861443aaENSP00000600620.1
 
Protein coding
--GENCODE Basic
ENST00000930577.1TCOF1-25848731447aaENSP00000600636.1
 
Protein coding
--GENCODE Basic
ENST00000930551.1TCOF1-23248701434aaENSP00000600610.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000930578.1TCOF1-25948571442aaENSP00000600637.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000930542.1TCOF1-22348501410aaENSP00000600601.1
 
Protein coding
--GENCODE Basic
ENST00000930559.1TCOF1-24048431428aaENSP00000600618.1
 
Protein coding
--GENCODE Basic
ENST00000323668.11TCOF1-20148321411aaENSP00000325223.6
 
Protein coding
CCDS4306Q13428-2 -GENCODE BasicTSL:1
ENST00000445265.6TCOF1-20648251412aaENSP00000409944.2
 
Protein coding
CCDS47306Q13428-8 -GENCODE BasicTSL:5
ENST00000930572.1TCOF1-25348251428aaENSP00000600631.1
 
Protein coding
--GENCODE Basic
ENST00000427724.7TCOF1-20448001450aaENSP00000390717.3
 
Protein coding
CCDS43388Q13428-6 -GENCODE BasicTSL:5
ENST00000930566.1TCOF1-24747821410aaENSP00000600625.1
 
Protein coding
--GENCODE Basic
ENST00000930585.1TCOF1-26647671418aaENSP00000600644.1
 
Protein coding
--GENCODE Basic
ENST00000930580.1TCOF1-26147581411aaENSP00000600639.1
 
Protein coding
--GENCODE Basic
ENST00000930552.1TCOF1-23347521395aaENSP00000600611.1
 
Protein coding
--GENCODE Basic
ENST00000930564.1TCOF1-24547271391aaENSP00000600623.1
 
Protein coding
--GENCODE Basic
ENST00000930568.1TCOF1-24947141388aaENSP00000600627.1
 
Protein coding
--GENCODE Basic
ENST00000930546.1TCOF1-22746911373aaENSP00000600605.1
 
Protein coding
--GENCODE Basic
ENST00000930541.1TCOF1-22246881352aaENSP00000600600.1
 
Protein coding
--GENCODE Basic
ENST00000930563.1TCOF1-24446771374aaENSP00000600622.1
 
Protein coding
--GENCODE Basic
ENST00000930583.1TCOF1-26446771387aaENSP00000600642.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000513346.5TCOF1-21146461488aaENSP00000427484.1
 
Protein coding
E7ETY2 -GENCODE BasicTSL:5
ENST00000439160.6TCOF1-20546441451aaENSP00000406888.2
 
Protein coding
CCDS47305Q13428-7 -GENCODE BasicTSL:5
ENST00000930550.1TCOF1-23146221351aaENSP00000600609.1
 
Protein coding
--GENCODE Basic
ENST00000930581.1TCOF1-26245741350aaENSP00000600640.1
 
Protein coding
--GENCODE Basic
ENST00000930569.1TCOF1-25045731342aaENSP00000600628.1
 
Protein coding
--GENCODE Basic
ENST00000930545.1TCOF1-22644781302aaENSP00000600604.1
 
Protein coding
--GENCODE Basic
ENST00000930549.1TCOF1-23044731301aaENSP00000600608.1
 
Protein coding
--GENCODE BasicAPPRIS ALT2
ENST00000504761.6TCOF1-20744671488aaENSP00000421655.2
 
Protein coding
CCDS54936Q13428-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000930574.1TCOF1-25544501304aaENSP00000600633.1
 
Protein coding
--GENCODE Basic
ENST00000930579.1TCOF1-26044341301aaENSP00000600638.1
 
Protein coding
--GENCODE Basic
ENST00000930584.1TCOF1-26543011262aaENSP00000600643.1
 
Protein coding
--GENCODE Basic
ENST00000930582.1TCOF1-26341951225aaENSP00000600641.1
 
Protein coding
--GENCODE Basic
ENST00000650162.1TCOF1-21941941358aaENSP00000497075.1
 
Protein coding
A0A3B3IS06 -CDS 3' incomplete
ENST00000674413.1TCOF1-22037261240aaENSP00000501343.1
 
Protein coding
A0A6I8PRA0 -CDS 5' incomplete
ENST00000513538.2TCOF1-2123526994aaENSP00000422567.2
 
Protein coding
H0Y8Y7 -GENCODE BasicTSL:5
ENST00000394269.7TCOF1-2033400958aaENSP00000377811.3
 
Protein coding
CCDS47307Q13428-5 -GENCODE BasicAPPRIS ALT2TSL:1
ENST00000646961.1TCOF1-218935297aaENSP00000496754.1
 
Protein coding
A0A2R8Y857 -CDS 3' incomplete
ENST00000515516.1TCOF1-215661188aaENSP00000426471.1
 
Protein coding
H0YA99 -TSL:5CDS 5' incomplete
ENST00000643812.1TCOF1-217974108aaENSP00000493833.1
 
Nonsense mediated decay
A0A2R8Y4M7 -CDS 5' incomplete
ENST00000506767.1TCOF1-210869148aaENSP00000426587.1
 
Nonsense mediated decay
H0YAB7 -TSL:5CDS 5' incomplete
ENST00000506063.1TCOF1-208526No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000515035.5TCOF1-2145240No protein-
 
Retained intron
--TSL:2
ENST00000514442.5TCOF1-2135195No protein-
 
Retained intron
--TSL:2
ENST00000506630.1TCOF1-209897No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,400 bps, Translation length: 958 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13428

CCDS

This transcript is a member of the Human CCDS set: CCDS47307

Transcript Support Level (TSL)

TSL:1

Version

ENST00000394269.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.