Human (GRCh38.p14)
Description

spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]

Gene Synonyms

HSD3, LCA3

Location
About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 21699 variant alleles and maps to 483 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000393545.9SPATA7-2032000599aaENSP00000377176.4
 
Protein coding
CCDS9883Q9P0W8-1 NM_018418.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000556553.5SPATA7-2172301567aaENSP00000451128.1
 
Protein coding
CCDS32132Q9P0W8-2 -GENCODE basicTSL:1
ENST00000356583.9SPATA7-2021891567aaENSP00000348991.5
 
Protein coding
CCDS32132Q9P0W8-2 -GENCODE basicTSL:1
ENST00000045347.11SPATA7-2011410458aaENSP00000045347.7
 
Protein coding
Q9P0W8-3 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000553885.5SPATA7-206805228aaENSP00000450606.1
 
Protein coding
G3V2E1 -TSL:3CDS 3' incomplete
ENST00000556406.5SPATA7-21675891aaENSP00000450809.1
 
Protein coding
H0YJ48 -TSL:3CDS 5' incomplete
ENST00000555401.5SPATA7-212545138aaENSP00000452435.1
 
Protein coding
G3V5N2 -TSL:3CDS 3' incomplete
ENST00000554802.1SPATA7-21040176aaENSP00000451019.1
 
Protein coding
H0YJ93 -TSL:3CDS 5' incomplete
ENST00000555515.5SPATA7-213108881aaENSP00000450882.1
 
Nonsense mediated decay
G3V2V4 -TSL:3
ENST00000555534.5SPATA7-21489085aaENSP00000450515.1
 
Nonsense mediated decay
G3V287 -TSL:3
ENST00000557248.5SPATA7-22080486aaENSP00000451690.1
 
Nonsense mediated decay
G3V4A9 -TSL:3
ENST00000556870.5SPATA7-21978653aaENSP00000452359.1
 
Nonsense mediated decay
G3V5H6 -TSL:3
ENST00000553908.5SPATA7-20776149aaENSP00000452546.1
 
Nonsense mediated decay
G3V5V8 -TSL:5
ENST00000554168.5SPATA7-20965146aaENSP00000451663.1
 
Nonsense mediated decay
G3V491 -TSL:4
ENST00000555356.5SPATA7-21159246aaENSP00000450654.1
 
Nonsense mediated decay
G3V491 -TSL:4
ENST00000557724.5SPATA7-22256846aaENSP00000452364.1
 
Nonsense mediated decay
G3V491 -TSL:4
ENST00000555715.5SPATA7-21554542aaENSP00000451181.1
 
Nonsense mediated decay
G3V3D2 -TSL:4
ENST00000554102.5SPATA7-208501No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000553626.5SPATA7-2053610No protein-
 
Retained intron
--TSL:2
ENST00000556666.5SPATA7-2182380No protein-
 
Retained intron
--TSL:2
ENST00000553303.1SPATA7-204885No protein-
 
Retained intron
--TSL:2
ENST00000557567.1SPATA7-221457No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,000 bps, Translation length: 599 residues

MANE

This MANE Select transcript contains ENSP00000377176 and matches to NM_018418.5 and NP_060888.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0W8

CCDS

This transcript is a member of the Human CCDS set: CCDS9883

Transcript Support Level (TSL)

TSL:1

Version

ENST00000393545.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.