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Human (GRCh38.p14)
Description

polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]

Gene Synonyms

GALNAC-T3, HFTC, HHS

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 19168 variant alleles and maps to 682 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000392701.8GALNT3-2013436633aaENSP00000376465.3
 
Protein coding
CCDS2226Q14435-1 NM_004482.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000715282.1GALNT3-2102733633aaENSP00000520447.1
 
Protein coding
CCDS2226--GENCODE BasicAPPRIS P1
ENST00000409882.5GALNT3-2022107371aaENSP00000386955.1
 
Protein coding
E7EUL0 -GENCODE BasicTSL:1
ENST00000412248.5GALNT3-2031954464aaENSP00000412643.1
 
Protein coding
C9J2C3 -TSL:5CDS 3' incomplete
ENST00000447156.1GALNT3-20857011aaENSP00000399880.1
 
Protein coding
C9JY57 -TSL:4CDS 3' incomplete
ENST00000414977.5GALNT3-20455957aaENSP00000413477.1
 
Protein coding
C9JXX2 -TSL:4CDS 3' incomplete
ENST00000431484.1GALNT3-20654090aaENSP00000397112.1
 
Protein coding
C9J388 -TSL:4CDS 3' incomplete
ENST00000422973.1GALNT3-20553625aaENSP00000413694.1
 
Protein coding
C9JW45 -TSL:4CDS 3' incomplete
ENST00000437849.1GALNT3-20779989aaENSP00000391104.1
 
Nonsense mediated decay
H7BZS4 -TSL:5CDS 5' incomplete
ENST00000463254.1GALNT3-209603No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,436 bps, Translation length: 633 residues

MANE

This MANE Select transcript contains ENSP00000376465 and matches to NM_004482.4 and NP_004473.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14435

CCDS

This transcript is a member of the Human CCDS set: CCDS2226

Transcript Support Level (TSL)

TSL:1

Version

ENST00000392701.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.