Transcript: ENST00000379677.2 LINC01460-201

Description

long intergenic non-protein coding RNA 1460 [Source:HGNC Symbol;Acc:HGNC:50858]

Location

About this transcript

This transcript has 2 exons, is associated with 3712 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000379677.2	LINC01460-201	2860	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000702883.1	LINC01460-209	1447	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000685646.1	LINC01460-202	1316	No protein	-	lncRNA	-	-
ENST00000689224.1	LINC01460-206	1286	No protein	-	lncRNA	-	-
ENST00000687803.1	LINC01460-204	1268	No protein	-	lncRNA	-	-
ENST00000689220.1	LINC01460-205	1233	No protein	-	lncRNA	-	-
ENST00000691814.1	LINC01460-208	1211	No protein	-	lncRNA	-	-
ENST00000691312.2	LINC01460-207	777	No protein	-	lncRNA	-	-
ENST00000687139.1	LINC01460-203	599	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,860 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000379677.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.