Human (GRCh38.p14)
Description

podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]

Gene Synonyms

GP135, GP200, PC, PCLP, PDX, PODXL1

About this transcript

This transcript has 9 exons, is annotated with 21 domains and features, is associated with 25309 variant alleles and maps to 498 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378555.8PODXL-2025986558aaENSP00000367817.3
 
Protein coding
CCDS34755O00592-1 NM_001018111.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000322985.9PODXL-2012011526aaENSP00000319782.9
 
Protein coding
CCDS47714O00592-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000446198.5PODXL-2036170324aaENSP00000390152.1
 
Nonsense mediated decay
G3V0E6 -TSL:2
ENST00000465001.1PODXL-204530No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487965.1PODXL-207809No protein-
 
Retained intron
--TSL:2
ENST00000484346.1PODXL-206797No protein-
 
Retained intron
--TSL:2
ENST00000482581.1PODXL-205588No protein-
 
Retained intron
--TSL:2
ENST00000490761.5PODXL-208571No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,986 bps, Translation length: 558 residues

MANE

This MANE Select transcript contains ENSP00000367817 and matches to NM_001018111.3 and NP_001018121.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00592

CCDS

This transcript is a member of the Human CCDS set: CCDS34755

Transcript Support Level (TSL)

TSL:1

Version

ENST00000378555.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.