Human (GRCh38.p14)
Description

vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]

Gene Synonyms

BLTP5A, CHAC, KIAA0986

Location
About this transcript

This transcript has 71 exons, is annotated with 23 domains and features, is associated with 107764 variant alleles and maps to 1903 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360280.8VPS13A-202152273174aaENSP00000353422.3
 
Protein coding
CCDS6655Q96RL7-1 NM_033305.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000376636.7VPS13A-203111453135aaENSP00000365823.3
 
Protein coding
CCDS55321Q96RL7-3 -GENCODE basicTSL:1
ENST00000645632.1VPS13A-213100863069aaENSP00000496361.1
 
Protein coding
CCDS47983Q96RL7-4 -GENCODE basicAPPRIS ALT1
ENST00000643348.1VPS13A-21299653095aaENSP00000493592.1
 
Protein coding
CCDS6656Q96RL7-2 -GENCODE basic
ENST00000419472.1VPS13A-2052781383aaENSP00000414410.1
 
Protein coding
H0Y7P8 -TSL:1CDS 5' incomplete
ENST00000467124.1VPS13A-20732441aaENSP00000441840.1
 
Protein coding
H0YG53 -TSL:5CDS 5' incomplete
ENST00000493341.1VPS13A-2102001177aaENSP00000437478.1
 
Nonsense mediated decay
H0YF78 -TSL:2CDS 5' incomplete
ENST00000423463.6VPS13A-2062702No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000376646.3VPS13A-2042262No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000484581.6VPS13A-2091155No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000471439.1VPS13A-208510No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000355766.5VPS13A-201753No protein-
 
Retained intron
--TSL:3
ENST00000539950.1VPS13A-211390No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 71, Coding exons: 71, Transcript length: 11,145 bps, Translation length: 3,135 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RL7

CCDS

This transcript is a member of the Human CCDS set: CCDS55321

Transcript Support Level (TSL)

TSL:1

Version

ENST00000376636.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.