Human (GRCh38.p14)
Description

collagen type IV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2202]

About this transcript

This transcript has 52 exons, is annotated with 103 domains and features, is associated with 74684 variant alleles and maps to 1346 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000375820.10COL4A1-20165401669aaENSP00000364979.4
 
Protein coding
CCDS9511P02462-1 NM_001845.6MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000615732.3COL4A1-20567421605aaENSP00000478222.3
 
Protein coding
A0A087WTY5 -GENCODE BasicTSL:5
ENST00000650424.2COL4A1-21763861667aaENSP00000497477.2
 
Protein coding
A0A3B3ISV3 -GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000714330.1COL4A1-22062401554aaENSP00000519606.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000543140.6COL4A1-2042549519aaENSP00000443348.1
 
Protein coding
CCDS76649P02462-2 -GENCODE BasicTSL:1
ENST00000647797.2COL4A1-2072345454aaENSP00000497756.2
 
Protein coding
A0A3B3ITG7 -GENCODE PrimaryGENCODE Basic
ENST00000648695.2COL4A1-209213160aaENSP00000497713.2
 
Protein coding
A0A3B3ITC8 -GENCODE PrimaryGENCODE Basic
ENST00000650566.2COL4A1-218184757aaENSP00000498007.2
 
Protein coding
A0A3B3IU02 -GENCODE Basic
ENST00000650115.2COL4A1-215183852aaENSP00000498030.2
 
Protein coding
A0A3B3ITS9 -GENCODE Basic
ENST00000649484.2COL4A1-212922188aaENSP00000497355.2
 
Protein coding
A0A3B3ISH5 -GENCODE PrimaryGENCODE Basic
ENST00000648966.2COL4A1-210836217aaENSP00000497533.2
 
Protein coding
A0A3B3ISZ8 -GENCODE PrimaryGENCODE Basic
ENST00000648989.2COL4A1-21146771aaENSP00000498187.2
 
Protein coding
A0A3B3IUD0 -GENCODE Basic
ENST00000714331.1COL4A1-2216423750aaENSP00000519607.1
 
Nonsense mediated decay
---
ENST00000714329.1COL4A1-2196371744aaENSP00000519605.1
 
Nonsense mediated decay
---
ENST00000649738.1COL4A1-2142644No protein-
 
Retained intron
---
ENST00000649720.1COL4A1-2132476No protein-
 
Retained intron
---
ENST00000648170.1COL4A1-2081372No protein-
 
Retained intron
---
ENST00000647632.1COL4A1-2061294No protein-
 
Retained intron
---
ENST00000467182.1COL4A1-202593No protein-
 
Retained intron
--TSL:3
ENST00000474391.1COL4A1-203581No protein-
 
Retained intron
--TSL:2
ENST00000650138.1COL4A1-216350No protein-
 
Retained intron
---
Statistics

Exons: 52, Coding exons: 52, Transcript length: 6,540 bps, Translation length: 1,669 residues

MANE

This MANE Select transcript contains ENSP00000364979 and matches to NM_001845.6 and NP_001836.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02462

CCDS

This transcript is a member of the Human CCDS set: CCDS9511

Transcript Support Level (TSL)

TSL:1

Version

ENST00000375820.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.