Transcript: ENST00000368924.9 DDO-202

Description

D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]

Gene Synonyms

DASOX, DASPO

Location

Chromosome 6: 110,391,784-110,415,575 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 10698 variant alleles and maps to 404 oligo probes.

Gene

This transcript is a product of gene ENSG00000203797.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000368924.9	DDO-202	2130	341aa	ENSP00000357920.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5082	Q99489-1	NM_001372108.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000368923.8	DDO-201	1953	282aa	ENSP00000357919.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5083	Q99489-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000479373.1	DDO-203	2021	110aa	ENSP00000436642.1	Nonsense mediated decay		F2Z2E0	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,130 bps, Translation length: 341 residues

MANE

This MANE Select transcript contains ENSP00000357920 and matches to NM_001372108.2 and NP_001359037.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99489

CCDS

This transcript is a member of the Human CCDS set: CCDS5082

Transcript Support Level (TSL)

TSL:1

Version

ENST00000368924.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000368924.9 DDO-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000368924.9 DDO-202

Summary

About Us

Get help

Our sister sites

Follow us