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Human (GRCh38.p14)
Description

SH3 and multiple ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:15474]

Gene Synonyms

SPANK-1, SSTRIP, SYNAMON

Location
About this transcript

This transcript has 22 exons, is annotated with 106 domains and features, is associated with 28171 variant alleles and maps to 654 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000293441.6SHANK1-20196362161aaENSP00000293441.1
 
Protein coding
CCDS12799Q9Y566-1 NM_016148.5MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000391814.5SHANK1-20466222169aaENSP00000375690.1
 
Protein coding
H9KV90 -GENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:5
ENST00000359082.3SHANK1-20264592152aaENSP00000351984.2
 
Protein coding
Q9Y566-3 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000468654.2SHANK1-206964183aaENSP00000469719.1
 
Nonsense mediated decay
M0QYB5 -TSL:3CDS 5' incomplete
ENST00000391813.5SHANK1-2034785No protein-
 
Retained intron
--TSL:1
ENST00000483128.1SHANK1-207780No protein-
 
Retained intron
--TSL:3
ENST00000461154.1SHANK1-205558No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 22, Coding exons: 22, Transcript length: 6,459 bps, Translation length: 2,152 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y566

Transcript Support Level (TSL)

TSL:5

Version

ENST00000359082.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

confirm experimentally [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.