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Human (GRCh38.p14)
Description

synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]

Gene Synonyms

INPP5G, PARK20

Location
About this transcript

This transcript has 32 exons, is annotated with 24 domains and features, is associated with 39246 variant alleles and maps to 920 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000674351.1SYNJ1-21470681311aaENSP00000501530.1
 
Protein coding
CCDS33540O43426-2 NM_203446.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000382499.7SYNJ1-20370991350aaENSP00000371939.2
 
Protein coding
C9JFZ1 -GENCODE PrimaryGENCODE BasicAPPRIS P4TSL:1
ENST00000674204.1SYNJ1-21270851311aaENSP00000501504.1
 
Protein coding
CCDS33540O43426-2 -GENCODE BasicAPPRIS ALT2
ENST00000433931.7SYNJ1-20670751612aaENSP00000409667.2
 
Protein coding
CCDS33539J3KQV8 -GENCODE PrimaryGENCODE BasicTSL:1
ENST00000357345.7SYNJ1-20170591295aaENSP00000349903.3
 
Protein coding
CCDS54483O43426-4 -GENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:5
ENST00000674308.1SYNJ1-21370441573aaENSP00000501426.1
 
Protein coding
O43426-1 -GENCODE Basic
ENST00000382491.7SYNJ1-20269581264aaENSP00000371931.4
 
Protein coding
J3KPK1 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000630077.3SYNJ1-21169201526aaENSP00000487560.1
 
Protein coding
CCDS54484A0A0D9SGJ6 -GENCODE PrimaryGENCODE BasicTSL:1
ENST00000438952.5SYNJ1-2073604187aaENSP00000388869.1
 
Protein coding
H7BZC2 -TSL:5CDS 5' incomplete
ENST00000429236.5SYNJ1-2052212695aaENSP00000413649.1
 
Protein coding
C9JW66 -TSL:1CDS 3' incomplete
ENST00000456084.1SYNJ1-208583178aaENSP00000412707.1
 
Protein coding
C9J1Z6 -TSL:2CDS 3' incomplete
ENST00000418301.3SYNJ1-204422131aaENSP00000387868.1
 
Protein coding
H7BZ56 -TSL:3CDS 5' incomplete
ENST00000464778.1SYNJ1-209578No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000467445.1SYNJ1-210977No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 32, Coding exons: 30, Transcript length: 7,059 bps, Translation length: 1,295 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43426

CCDS

This transcript is a member of the Human CCDS set: CCDS54483

Transcript Support Level (TSL)

TSL:5

Version

ENST00000357345.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.