Human (GRCh38.p14)
Description

CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]

Gene Synonyms

SCIP1, SPEC1

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 3640 variant alleles and maps to 556 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357235.6CDC42SE1-201300679aaENSP00000349773.4
 
Protein coding
CCDS981Q9NRR8-1 NM_020239.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P4TSL:1
ENST00000890179.1CDC42SE1-213361379aaENSP00000560238.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000439374.6CDC42SE1-202349879aaENSP00000475845.1
 
Protein coding
CCDS981Q9NRR8-1 -GENCODE PrimaryGENCODE BasicAPPRIS P4TSL:5
ENST00000919199.1CDC42SE1-218321480aaENSP00000589258.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000540998.5CDC42SE1-207318179aaENSP00000445647.1
 
Protein coding
CCDS981Q9NRR8-1 -GENCODE BasicAPPRIS P4TSL:2
ENST00000919200.1CDC42SE1-219314578aaENSP00000589259.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000919201.1CDC42SE1-220314378aaENSP00000589260.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000890175.1CDC42SE1-209313180aaENSP00000560234.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000919198.1CDC42SE1-217310778aaENSP00000589257.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000919202.1CDC42SE1-221302279aaENSP00000589261.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000890174.1CDC42SE1-208300180aaENSP00000560233.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000890180.1CDC42SE1-214195979aaENSP00000560239.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000890176.1CDC42SE1-210159779aaENSP00000560235.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000890182.1CDC42SE1-216153579aaENSP00000560241.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000963038.1CDC42SE1-224143677aaENSP00000633097.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000919203.1CDC42SE1-222142579aaENSP00000589262.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000919204.1CDC42SE1-223138280aaENSP00000589263.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000890178.1CDC42SE1-212133142aaENSP00000560237.1
 
Protein coding
--GENCODE Basic
ENST00000890181.1CDC42SE1-215131579aaENSP00000560240.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000963039.1CDC42SE1-225124779aaENSP00000633098.1
 
Protein coding
CCDS981--GENCODE BasicAPPRIS P4
ENST00000890177.1CDC42SE1-211122442aaENSP00000560236.1
 
Protein coding
--GENCODE Basic
ENST00000492796.5CDC42SE1-2061174No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000470278.5CDC42SE1-203939No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000491825.1CDC42SE1-205837No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000483763.5CDC42SE1-2042379No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 5, Coding exons: 3, Transcript length: 3,006 bps, Translation length: 79 residues

MANE

This MANE Select transcript contains ENSP00000349773 and matches to NM_020239.4 and NP_064624.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NRR8

CCDS

This transcript is a member of the Human CCDS set: CCDS981

Transcript Support Level (TSL)

TSL:1

Version

ENST00000357235.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.