Human (GRCh38.p14)
Description

nephrocystin 1 [Source:HGNC Symbol;Acc:HGNC:7905]

Gene Synonyms

JBTS4, NPH1, SLSN1

About this transcript

This transcript has 18 exons, is annotated with 19 domains and features, is associated with 32067 variant alleles and maps to 375 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000445609.7NPHP1-2072522677aaENSP00000389879.3
 
Protein coding
CCDS46386O15259-2 NM_001128178.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000674677.1NPHP1-2124034609aaENSP00000502265.1
 
Protein coding
A0A6Q8PGI7 -CDS 5' incomplete
ENST00000675067.1NPHP1-2133885410aaENSP00000502817.1
 
Protein coding
A0A6Q8PHS3 -GENCODE basic
ENST00000316534.8NPHP1-2013756733aaENSP00000313169.4
 
Protein coding
CCDS2086O15259-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000393272.7NPHP1-2032752732aaENSP00000376953.3
 
Protein coding
CCDS46385O15259-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000417665.5NPHP1-2042246711aaENSP00000402176.1
 
Protein coding
C9JNM7 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000676028.1NPHP1-2182225616aaENSP00000502639.1
 
Protein coding
A0A6Q8PHD4 -GENCODE basicAPPRIS ALT2
ENST00000676053.1NPHP1-2192218614aaENSP00000502475.1
 
Protein coding
CCDS46384O15259-3 -GENCODE basic
ENST00000355301.8NPHP1-2021932614aaENSP00000347452.4
 
Protein coding
CCDS46384O15259-3 -GENCODE basicTSL:1
ENST00000676091.1NPHP1-2201313409aaENSP00000502528.1
 
Protein coding
A0A6Q8PH10 -CDS 5' incomplete
ENST00000418527.1NPHP1-205742121aaENSP00000412351.1
 
Protein coding
C9J082 -GENCODE basicTSL:1
ENST00000422492.1NPHP1-20635747aaENSP00000392562.1
 
Protein coding
H7C014 -TSL:3CDS 5' incomplete
ENST00000449600.1NPHP1-20848645aaENSP00000406453.1
 
Nonsense mediated decay
H7C2K4 -TSL:3CDS 5' incomplete
ENST00000496524.5NPHP1-21110006No protein-
 
Retained intron
--TSL:2
ENST00000675294.1NPHP1-2146665No protein-
 
Retained intron
---
ENST00000675752.1NPHP1-2174078No protein-
 
Retained intron
---
ENST00000676165.1NPHP1-2214050No protein-
 
Retained intron
---
ENST00000461707.5NPHP1-2093822No protein-
 
Retained intron
--TSL:2
ENST00000675632.1NPHP1-2163791No protein-
 
Retained intron
---
ENST00000676258.1NPHP1-2223171No protein-
 
Retained intron
---
ENST00000675356.1NPHP1-2153065No protein-
 
Retained intron
---
ENST00000493051.1NPHP1-210577No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 18, Coding exons: 18, Transcript length: 1,932 bps, Translation length: 614 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15259

CCDS

This transcript is a member of the Human CCDS set: CCDS46384

Transcript Support Level (TSL)

TSL:1

Version

ENST00000355301.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.