Human (GRCh38.p14)
Description

nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]

Gene Synonyms

NPAP60L

Location
About this transcript

This transcript has 8 exons, is annotated with 28 domains and features, is associated with 13421 variant alleles and maps to 935 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000347635.9NUP50-2015151468aaENSP00000345895.3
 
Protein coding
CCDS14062Q9UKX7-1 NM_007172.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000407019.6NUP50-2032059440aaENSP00000385555.2
 
Protein coding
CCDS14063Q9UKX7-2 -GENCODE basicTSL:1
ENST00000396096.6NUP50-2021895440aaENSP00000379403.2
 
Protein coding
CCDS14063Q9UKX7-2 -GENCODE basicTSL:1
ENST00000417702.5NUP50-2045848aaENSP00000394450.1
 
Protein coding
A0A0G2JI20 -TSL:4CDS 3' incomplete
ENST00000424634.5NUP50-20757945aaENSP00000415062.1
 
Protein coding
X6RKQ2 -TSL:3CDS 3' incomplete
ENST00000432340.1NUP50-2095514aaENSP00000400465.1
 
Protein coding
--TSL:5CDS 3' incomplete
ENST00000422489.1NUP50-206543178aaENSP00000416264.1
 
Protein coding
B0QY21 -TSL:3CDS 3' incomplete
ENST00000430547.5NUP50-20853776aaENSP00000397960.1
 
Protein coding
B1AHA5 -TSL:4CDS 3' incomplete
ENST00000445721.5NUP50-21144310aaENSP00000398297.1
 
Protein coding
A0A0G2JIF9 -TSL:5CDS 3' incomplete
ENST00000419387.5NUP50-205101830aaENSP00000391987.1
 
Nonsense mediated decay
F2Z3L9 -TSL:3
ENST00000434760.5NUP50-21076330aaENSP00000388426.1
 
Nonsense mediated decay
F2Z3L9 -TSL:4
ENST00000486184.1NUP50-216821No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000461194.5NUP50-212550No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000461437.5NUP50-213531No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000491860.1NUP50-217493No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000493456.5NUP50-218478No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000484186.5NUP50-215431No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000469163.1NUP50-2143507No protein-
 
Retained intron
--TSL:2
ENST00000497960.5NUP50-219986No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,151 bps, Translation length: 468 residues

MANE

This MANE Select transcript contains ENSP00000345895 and matches to NM_007172.4 and NP_009103.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKX7

CCDS

This transcript is a member of the Human CCDS set: CCDS14062

Transcript Support Level (TSL)

TSL:1

Version

ENST00000347635.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.