Transcript: ENST00000334146.10 MIR22HG-201

Description

MIR22 host gene [Source:HGNC Symbol;Acc:HGNC:28219]

Gene Synonyms

C17ORF91, DKFZP686O06159, MGC14376

Location

Chromosome 17: 1,711,447-1,716,289 reverse strand.

About this transcript

This transcript has 4 exons and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000186594.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000577164.2	MIR22HG-212	2876	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000742856.1	MIR22HG-233	2749	No protein	-	lncRNA	-	-
ENST00000574306.3	MIR22HG-208	2654	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000742907.1	MIR22HG-284	2532	No protein	-	lncRNA	-	-
ENST00000691432.2	MIR22HG-228	2518	No protein	-	lncRNA	-	-
ENST00000574016.7	MIR22HG-207	2095	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000742901.1	MIR22HG-278	2035	No protein	-	lncRNA	-	-
ENST00000742885.1	MIR22HG-262	2018	No protein	-	lncRNA	-	-
ENST00000608913.7	MIR22HG-215	2008	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000742888.1	MIR22HG-265	1979	No protein	-	lncRNA	-	-
ENST00000608198.8	MIR22HG-213	1948	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000691506.2	MIR22HG-229	1940	No protein	-	lncRNA	-	-
ENST00000573075.7	MIR22HG-205	1932	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000609990.8	MIR22HG-218	1919	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000742889.1	MIR22HG-266	1899	No protein	-	lncRNA	-	-
ENST00000609442.7	MIR22HG-217	1875	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000742877.1	MIR22HG-254	1870	No protein	-	lncRNA	-	-
ENST00000742884.1	MIR22HG-261	1852	No protein	-	lncRNA	-	-
ENST00000686184.3	MIR22HG-221	1851	No protein	-	lncRNA	-	-
ENST00000609398.7	MIR22HG-216	1843	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000575626.7	MIR22HG-209	1826	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000742887.1	MIR22HG-264	1819	No protein	-	lncRNA	-	-
ENST00000688431.3	MIR22HG-223	1786	No protein	-	lncRNA	-	-
ENST00000576489.8	MIR22HG-210	1786	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000742886.1	MIR22HG-263	1783	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000610106.8	MIR22HG-219	1779	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000742879.1	MIR22HG-256	1717	No protein	-	lncRNA	-	-
ENST00000742904.1	MIR22HG-281	1715	No protein	-	lncRNA	-	-
ENST00000742872.1	MIR22HG-249	1708	No protein	-	lncRNA	-	-
ENST00000742873.1	MIR22HG-250	1705	No protein	-	lncRNA	-	-
ENST00000691301.2	MIR22HG-227	1697	No protein	-	lncRNA	-	-
ENST00000608245.7	MIR22HG-214	1690	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000689051.2	MIR22HG-224	1682	No protein	-	lncRNA	-	-
ENST00000742865.1	MIR22HG-242	1680	No protein	-	lncRNA	-	-
ENST00000689672.2	MIR22HG-225	1674	No protein	-	lncRNA	-	-
ENST00000742899.1	MIR22HG-276	1653	No protein	-	lncRNA	-	-
ENST00000742862.1	MIR22HG-239	1638	No protein	-	lncRNA	-	-
ENST00000686705.2	MIR22HG-222	1629	No protein	-	lncRNA	-	-
ENST00000702134.1	MIR22HG-232	1608	No protein	-	lncRNA	-	-
ENST00000742860.1	MIR22HG-237	1582	No protein	-	lncRNA	-	-
ENST00000742874.1	MIR22HG-251	1552	No protein	-	lncRNA	-	-
ENST00000742892.1	MIR22HG-269	1540	No protein	-	lncRNA	-	-
ENST00000571091.8	MIR22HG-203	1536	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000691689.2	MIR22HG-230	1527	No protein	-	lncRNA	-	-
ENST00000685207.2	MIR22HG-220	1520	No protein	-	lncRNA	-	-
ENST00000742875.1	MIR22HG-252	1519	No protein	-	lncRNA	-	-
ENST00000571595.7	MIR22HG-204	1511	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000334146.10	MIR22HG-201	1508	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000742894.1	MIR22HG-271	1479	No protein	-	lncRNA	-	-
ENST00000742882.1	MIR22HG-259	1476	No protein	-	lncRNA	-	-
ENST00000742898.1	MIR22HG-275	1476	No protein	-	lncRNA	-	-
ENST00000742870.1	MIR22HG-247	1451	No protein	-	lncRNA	-	-
ENST00000701645.1	MIR22HG-231	1444	No protein	-	lncRNA	-	-
ENST00000742876.1	MIR22HG-253	1439	No protein	-	lncRNA	-	-
ENST00000742871.1	MIR22HG-248	1412	No protein	-	lncRNA	-	-
ENST00000742906.1	MIR22HG-283	1408	No protein	-	lncRNA	-	-
ENST00000742883.1	MIR22HG-260	1399	No protein	-	lncRNA	-	-
ENST00000742903.1	MIR22HG-280	1399	No protein	-	lncRNA	-	-
ENST00000742866.1	MIR22HG-243	1369	No protein	-	lncRNA	-	-
ENST00000690262.3	MIR22HG-226	1366	No protein	-	lncRNA	-	-
ENST00000742905.1	MIR22HG-282	1347	No protein	-	lncRNA	-	-
ENST00000742861.1	MIR22HG-238	1311	No protein	-	lncRNA	-	-
ENST00000576749.7	MIR22HG-211	1303	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000742891.1	MIR22HG-268	1265	No protein	-	lncRNA	-	-
ENST00000742893.1	MIR22HG-270	1249	No protein	-	lncRNA	-	-
ENST00000742863.1	MIR22HG-240	1223	No protein	-	lncRNA	-	-
ENST00000742880.1	MIR22HG-257	1219	No protein	-	lncRNA	-	-
ENST00000742878.1	MIR22HG-255	1212	No protein	-	lncRNA	-	-
ENST00000742900.1	MIR22HG-277	1206	No protein	-	lncRNA	-	-
ENST00000742881.1	MIR22HG-258	1205	No protein	-	lncRNA	-	-
ENST00000570416.7	MIR22HG-202	1189	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000742902.1	MIR22HG-279	1085	No protein	-	lncRNA	-	-
ENST00000742857.1	MIR22HG-234	1036	No protein	-	lncRNA	-	-
ENST00000742895.1	MIR22HG-272	947	No protein	-	lncRNA	-	-
ENST00000742896.1	MIR22HG-273	946	No protein	-	lncRNA	-	-
ENST00000573127.5	MIR22HG-206	899	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000742890.1	MIR22HG-267	866	No protein	-	lncRNA	-	-
ENST00000742897.1	MIR22HG-274	848	No protein	-	lncRNA	-	-
ENST00000742858.1	MIR22HG-235	839	No protein	-	lncRNA	-	-
ENST00000742867.1	MIR22HG-244	809	No protein	-	lncRNA	-	-
ENST00000742868.1	MIR22HG-245	698	No protein	-	lncRNA	-	-
ENST00000742869.1	MIR22HG-246	692	No protein	-	lncRNA	-	-
ENST00000742859.1	MIR22HG-236	676	No protein	-	lncRNA	-	-
ENST00000742908.1	MIR22HG-285	569	No protein	-	lncRNA	-	-
ENST00000742864.1	MIR22HG-241	547	No protein	-	lncRNA	-	-
ENST00000742909.1	MIR22HG-286	380	No protein	-	lncRNA	-	-
ENST00000742910.1	MIR22HG-287	237	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,508 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000334146.10

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

3' nested supported extension [Definitions]

454 RNA-Seq supported

Transcript: ENST00000334146.10 MIR22HG-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000334146.10 MIR22HG-201

Summary

About Us

Get help

Our sister sites

Follow us