Transcript: ENST00000330148.6 FAM87A-201

Description

family with sequence similarity 87 member A [Source:HGNC Symbol;Acc:HGNC:27233]

Location

Chromosome 8: 375,931-383,174 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 4161 variant alleles and maps to 504 oligo probes.

Gene

This transcript is a product of gene ENSG00000182366.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000330148.6	FAM87A-201	4013	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000523195.5	FAM87A-202	3837	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000662707.1	FAM87A-205	3778	No protein	-	lncRNA	-	-
ENST00000668758.1	FAM87A-206	3547	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602608.1	FAM87A-203	1517	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000658419.1	FAM87A-204	1081	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 4,013 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000330148.6

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000330148.6 FAM87A-201

Summary

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Transcript: ENST00000330148.6 FAM87A-201

Summary

About Us

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