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Human (GRCh38.p14)
Description

sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]

Gene Synonyms

SPHK

Location
About this transcript

This transcript has 6 exons, is annotated with 17 domains and features and maps to 296 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000592299.6SPHK1-2101816384aaENSP00000465726.2
 
Protein coding
CCDS45785Q9NYA1-1 NM_001142601.2MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000545180.5SPHK1-2032238384aaENSP00000440970.1
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE BasicAPPRIS P2TSL:2
ENST00000960428.1SPHK1-2192191398aaENSP00000630487.1
 
Protein coding
CCDS59297--GENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000323374.8SPHK1-2012138470aaENSP00000313681.3
 
Protein coding
CCDS11744Q9NYA1-2 -GENCODE BasicAPPRIS ALT2TSL:1
ENST00000889759.1SPHK1-2141989384aaENSP00000559818.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE PrimaryGENCODE BasicAPPRIS P2
ENST00000590959.5SPHK1-2071851398aaENSP00000468547.1
 
Protein coding
CCDS59297Q9NYA1-3 -GENCODE BasicAPPRIS ALT2TSL:1
ENST00000889756.1SPHK1-2111782384aaENSP00000559815.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000392496.3SPHK1-2021779384aaENSP00000376285.2
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000960427.1SPHK1-2181765384aaENSP00000630486.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889758.1SPHK1-2131752384aaENSP00000559817.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889761.1SPHK1-2161744384aaENSP00000559820.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE PrimaryGENCODE BasicAPPRIS P2
ENST00000960429.1SPHK1-2201732377aaENSP00000630488.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000889760.1SPHK1-2151710384aaENSP00000559819.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889757.1SPHK1-2121689377aaENSP00000559816.1
 
Protein coding
--GENCODE Basic
ENST00000889762.1SPHK1-2171632333aaENSP00000559821.1
 
Protein coding
--GENCODE Basic
ENST00000588682.5SPHK1-205858152aaENSP00000466422.1
 
Protein coding
K7EMA4 -TSL:3CDS 3' incomplete
ENST00000590379.5SPHK1-206588111aaENSP00000465002.1
 
Protein coding
K7EJ32 -TSL:3CDS 3' incomplete
ENST00000591651.5SPHK1-2085415aaENSP00000468474.1
 
Protein coding
--TSL:4CDS 3' incomplete
ENST00000591762.1SPHK1-2092502No protein-
 
Retained intron
--TSL:2
ENST00000587167.1SPHK1-204456No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,138 bps, Translation length: 470 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NYA1

CCDS

This transcript is a member of the Human CCDS set: CCDS11744

Transcript Support Level (TSL)

TSL:1

Version

ENST00000323374.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.