Transcript: ENST00000316249.4 KCNG2-201

Description

potassium voltage-gated channel modifier subfamily G member 2 [Source:HGNC Symbol;Acc:HGNC:6249]

Gene Synonyms

KCNF2, KV6.2

Location

Chromosome 18: 79,797,938-79,900,100 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 42 domains and features, is associated with 50347 variant alleles and maps to 225 oligo probes.

Gene

This transcript is a product of gene ENSG00000178342.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000316249.4	KCNG2-201	1876	466aa	ENSP00000315654.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12019	Q9UJ96	NM_012283.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000590307.1	KCNG2-202	1538	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,876 bps, Translation length: 466 residues

MANE

This MANE Select transcript contains ENSP00000315654 and matches to NM_012283.2 and NP_036415.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJ96

CCDS

This transcript is a member of the Human CCDS set: CCDS12019

Transcript Support Level (TSL)

TSL:1

Version

ENST00000316249.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000316249.4 KCNG2-201

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Transcript: ENST00000316249.4 KCNG2-201

Summary

About Us

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