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Human (GRCh38.p14)
Description

autophagy related 4D cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:20789]

Gene Synonyms

APG4-D, APG4D, AUTL4

Location
About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 5141 variant alleles and maps to 430 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000309469.9ATG4D-2011963474aaENSP00000311318.3
 
Protein coding
CCDS12241Q86TL0-1 NM_032885.6MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000588972.1ATG4D-210632177aaENSP00000466759.1
 
Protein coding
K7EN30 -TSL:5CDS 5' incomplete
ENST00000586477.1ATG4D-205628209aaENSP00000467223.1
 
Protein coding
K7EP43 -TSL:5CDS 5' and 3' incomplete
ENST00000587256.1ATG4D-207607203aaENSP00000468780.1
 
Protein coding
K7ESM7 -TSL:5CDS 5' and 3' incomplete
ENST00000586863.5ATG4D-206529177aaENSP00000465089.1
 
Protein coding
K7EJA5 -TSL:4CDS 5' and 3' incomplete
ENST00000585437.1ATG4D-20237799aaENSP00000467694.1
 
Protein coding
K7EQ67 -TSL:5CDS 5' incomplete
ENST00000586417.5ATG4D-2041752160aaENSP00000467906.1
 
Nonsense mediated decay
K7EQN3 -TSL:2
ENST00000588667.5ATG4D-2081619228aaENSP00000467407.1
 
Nonsense mediated decay
K7EPJ0 -TSL:1
ENST00000588857.5ATG4D-2091555334aaENSP00000468290.1
 
Nonsense mediated decay
K7ERK1 -TSL:1
ENST00000589753.1ATG4D-21193167aaENSP00000466439.1
 
Nonsense mediated decay
K7EMB9 -TSL:1CDS 5' incomplete
ENST00000585752.5ATG4D-203729120aaENSP00000465716.1
 
Nonsense mediated decay
K7EKP6 -TSL:5
ENST00000590096.1ATG4D-2121282No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,963 bps, Translation length: 474 residues

MANE

This MANE Select transcript contains ENSP00000311318 and matches to NM_032885.6 and NP_116274.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86TL0

CCDS

This transcript is a member of the Human CCDS set: CCDS12241

Transcript Support Level (TSL)

TSL:1

Version

ENST00000309469.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.