Human (GRCh38.p14)
Description

DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]

Gene Synonyms

APR-5, DP97, MGC2835

About this transcript

This transcript has 20 exons, is annotated with 44 domains and features, is associated with 13383 variant alleles and maps to 843 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000306014.10DDX54-2014377881aaENSP00000304072.5
 
Protein coding
CCDS31907Q8TDD1-1 NM_024072.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:1
ENST00000314045.11DDX54-2024380882aaENSP00000323858.7
 
Protein coding
CCDS44984Q8TDD1-2 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000937023.1DDX54-2194373881aaENSP00000607082.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000937022.1DDX54-2184354874aaENSP00000607081.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000937029.1DDX54-2253101905aaENSP00000607088.1
 
Protein coding
--GENCODE Basic
ENST00000937025.1DDX54-2213092891aaENSP00000607084.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000937024.1DDX54-2203084880aaENSP00000607083.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000865166.1DDX54-2143076890aaENSP00000535225.1
 
Protein coding
--GENCODE Basic
ENST00000949504.1DDX54-2283076890aaENSP00000619563.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000865165.1DDX54-2133075889aaENSP00000535224.1
 
Protein coding
--GENCODE Basic
ENST00000937027.1DDX54-2233027873aaENSP00000607086.1
 
Protein coding
--GENCODE Basic
ENST00000949502.1DDX54-2263026873aaENSP00000619561.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000865168.1DDX54-2163019874aaENSP00000535227.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000865167.1DDX54-2153018873aaENSP00000535226.1
 
Protein coding
--GENCODE Basic
ENST00000949503.1DDX54-2272954849aaENSP00000619562.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000865169.1DDX54-2172903838aaENSP00000535228.1
 
Protein coding
--GENCODE Basic
ENST00000937028.1DDX54-2242845814aaENSP00000607087.1
 
Protein coding
--GENCODE Basic
ENST00000865163.1DDX54-2112830804aaENSP00000535222.1
 
Protein coding
--GENCODE Basic
ENST00000865164.1DDX54-2122824805aaENSP00000535223.1
 
Protein coding
--GENCODE Basic
ENST00000937026.1DDX54-2222637741aaENSP00000607085.1
 
Protein coding
--GENCODE Basic
ENST00000949505.1DDX54-2292317637aaENSP00000619564.1
 
Protein coding
--GENCODE Basic
ENST00000552375.1DDX54-210780208aaENSP00000448477.1
 
Protein coding
F8VRX4 -TSL:5CDS 3' incomplete
ENST00000546898.1DDX54-204479160aaENSP00000447098.1
 
Protein coding
H0YHH7 -TSL:3CDS 5' and 3' incomplete
ENST00000551344.1DDX54-20887282aaENSP00000448189.1
 
Nonsense mediated decay
H0YHZ9 -TSL:5CDS 5' incomplete
ENST00000549271.1DDX54-206756No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000550016.5DDX54-207594No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000551912.1DDX54-209458No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000548786.1DDX54-205498No protein-
 
Retained intron
--TSL:2
ENST00000546869.1DDX54-203420No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,377 bps, Translation length: 881 residues

MANE

This MANE Select transcript contains ENSP00000304072 and matches to NM_024072.4 and NP_076977.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDD1

CCDS

This transcript is a member of the Human CCDS set: CCDS31907

Transcript Support Level (TSL)

TSL:1

Version

ENST00000306014.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

NAGNAG splice site [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.