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Human (GRCh38.p14)
Description

RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]

Gene Synonyms

DKFZP727M111, FLJ12732, KIAA1403, MGC858

Location
About this transcript

This transcript has 25 exons, is annotated with 33 domains and features, is associated with 13318 variant alleles and maps to 645 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000304330.9RPAP1-20146631393aaENSP00000306123.4
 
Protein coding
CCDS10079Q9BWH6-1 NM_015540.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000912256.1RPAP1-22848701393aaENSP00000582315.1
 
Protein coding
CCDS10079--GENCODE BasicAPPRIS P1
ENST00000867493.1RPAP1-21948261393aaENSP00000537552.1
 
Protein coding
CCDS10079--GENCODE BasicAPPRIS P1
ENST00000912254.1RPAP1-22647621393aaENSP00000582313.1
 
Protein coding
CCDS10079--GENCODE BasicAPPRIS P1
ENST00000912253.1RPAP1-22546961371aaENSP00000582312.1
 
Protein coding
--GENCODE Basic
ENST00000912252.1RPAP1-22446391386aaENSP00000582311.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000867487.1RPAP1-21346121371aaENSP00000537546.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000867488.1RPAP1-21445761360aaENSP00000537547.1
 
Protein coding
--GENCODE Basic
ENST00000867491.1RPAP1-21745671359aaENSP00000537550.1
 
Protein coding
--GENCODE Basic
ENST00000912250.1RPAP1-22245311342aaENSP00000582309.1
 
Protein coding
--GENCODE Basic
ENST00000867490.1RPAP1-21645111340aaENSP00000537549.1
 
Protein coding
--GENCODE Basic
ENST00000867494.1RPAP1-22044781333aaENSP00000537553.1
 
Protein coding
--GENCODE Basic
ENST00000867492.1RPAP1-21844711329aaENSP00000537551.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000912251.1RPAP1-22343211280aaENSP00000582310.1
 
Protein coding
--GENCODE Basic
ENST00000867489.1RPAP1-21541801229aaENSP00000537548.1
 
Protein coding
--GENCODE Basic
ENST00000867495.1RPAP1-22141381220aaENSP00000537554.1
 
Protein coding
--GENCODE Basic
ENST00000561603.5RPAP1-20239061128aaENSP00000456207.1
 
Protein coding
H3BRE8 -GENCODE BasicTSL:5
ENST00000912255.1RPAP1-2273295940aaENSP00000582314.1
 
Protein coding
--GENCODE Basic
ENST00000970347.1RPAP1-2292788767aaENSP00000640406.1
 
Protein coding
--GENCODE Basic
ENST00000567866.5RPAP1-210955180aaENSP00000455381.1
 
Protein coding
H3BPM3 -TSL:5CDS 3' incomplete
ENST00000565035.1RPAP1-207601200aaENSP00000457203.1
 
Protein coding
H3BTJ6 -TSL:4CDS 5' and 3' incomplete
ENST00000566863.1RPAP1-209545128aaENSP00000455527.1
 
Protein coding
H3BPY8 -TSL:4CDS 3' incomplete
ENST00000562303.5RPAP1-20458971315aaENSP00000455363.1
 
Nonsense mediated decay
Q9BWH6-2 -TSL:1
ENST00000568413.1RPAP1-211586No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000565167.1RPAP1-2081712No protein-
 
Retained intron
--TSL:1
ENST00000564934.1RPAP1-206639No protein-
 
Retained intron
--TSL:3
ENST00000569829.1RPAP1-212597No protein-
 
Retained intron
--TSL:1
ENST00000563293.1RPAP1-205499No protein-
 
Retained intron
--TSL:3
ENST00000561631.1RPAP1-203401No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 25, Coding exons: 24, Transcript length: 4,663 bps, Translation length: 1,393 residues

MANE

This MANE Select transcript contains ENSP00000306123 and matches to NM_015540.4 and NP_056355.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BWH6

CCDS

This transcript is a member of the Human CCDS set: CCDS10079

Transcript Support Level (TSL)

TSL:1

Version

ENST00000304330.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.