Human (GRCh38.p14)
Description

syndecan 2 [Source:HGNC Symbol;Acc:HGNC:10659]

Gene Synonyms

CD362, FIBROGLYCAN, HSPG, HSPG1, SYND2

Location
About this transcript

This transcript has 5 exons, is annotated with 26 domains and features, is associated with 51044 variant alleles and maps to 665 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000302190.9SDC2-2013307201aaENSP00000307046.4
 
Protein coding
CCDS6272P34741 NM_002998.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000518385.5SDC2-2021583165aaENSP00000429045.1
 
Protein coding
E7ESK6 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000519914.5SDC2-2041318172aaENSP00000428256.1
 
Protein coding
E9PBI9 -GENCODE BasicTSL:2
ENST00000522911.5SDC2-207677172aaENSP00000427784.1
 
Protein coding
E9PBI9 -GENCODE BasicTSL:3
ENST00000523877.1SDC2-208621145aaENSP00000429662.2
 
Protein coding
E5RHU3 -TSL:5CDS 3' incomplete
ENST00000521590.5SDC2-206507137aaENSP00000429121.1
 
Protein coding
E5RJB8 -TSL:4CDS 3' incomplete
ENST00000520233.1SDC2-205563No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000519587.1SDC2-203557No protein-
 
Protein coding CDS not defined
--TSL:4
Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,307 bps, Translation length: 201 residues

MANE

This MANE Select transcript contains ENSP00000307046 and matches to NM_002998.4 and NP_002989.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P34741

CCDS

This transcript is a member of the Human CCDS set: CCDS6272

Transcript Support Level (TSL)

TSL:1

Version

ENST00000302190.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.