Human (GRCh38.p14)
Description

collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]

Location
About this transcript

This transcript has 28 exons, is annotated with 50 domains and features, is associated with 23361 variant alleles and maps to 705 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000300527.9COL6A2-20134451019aaENSP00000300527.4
 
Protein coding
CCDS13728P12110-1 NM_001849.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000857109.1COL6A2-22738911019aaENSP00000527168.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000968884.1COL6A2-23638051019aaENSP00000638943.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000968883.1COL6A2-23537661019aaENSP00000638942.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000857098.1COL6A2-21636301084aaENSP00000527157.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000857100.1COL6A2-21836241019aaENSP00000527159.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000857108.1COL6A2-22636211019aaENSP00000527167.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000857103.1COL6A2-22135711073aaENSP00000527162.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000857092.1COL6A2-21035621058aaENSP00000527151.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000857091.1COL6A2-20935261019aaENSP00000527150.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000857096.1COL6A2-21435071019aaENSP00000527155.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000857090.1COL6A2-20835051019aaENSP00000527149.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE BasicAPPRIS P3
ENST00000968880.1COL6A2-23234821033aaENSP00000638939.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000857106.1COL6A2-22434771042aaENSP00000527165.1
 
Protein coding
--GENCODE Basic
ENST00000857101.1COL6A2-21934601029aaENSP00000527160.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000968878.1COL6A2-23034521019aaENSP00000638937.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000968879.1COL6A2-23134391017aaENSP00000638938.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000857094.1COL6A2-21234341019aaENSP00000527153.1
 
Protein coding
CCDS13728A0A384MDP3 -GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000934972.1COL6A2-22934081016aaENSP00000605031.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000857093.1COL6A2-2113382998aaENSP00000527152.1
 
Protein coding
--GENCODE Basic
ENST00000857095.1COL6A2-2133378998aaENSP00000527154.1
 
Protein coding
--GENCODE Basic
ENST00000857099.1COL6A2-2173371998aaENSP00000527158.1
 
Protein coding
--GENCODE Basic
ENST00000857105.1COL6A2-22333691006aaENSP00000527164.1
 
Protein coding
--GENCODE Basic
ENST00000409416.6COL6A2-2033367828aaENSP00000387115.1
 
Protein coding
CCDS13730P12110-3 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000857102.1COL6A2-22033611002aaENSP00000527161.1
 
Protein coding
--GENCODE Basic
ENST00000934971.1COL6A2-2283359998aaENSP00000605030.1
 
Protein coding
--GENCODE Basic
ENST00000968882.1COL6A2-23433581001aaENSP00000638941.1
 
Protein coding
--GENCODE Basic
ENST00000857107.1COL6A2-2253345998aaENSP00000527166.1
 
Protein coding
--GENCODE Basic
ENST00000397763.6COL6A2-2023156918aaENSP00000380870.1
 
Protein coding
CCDS13729P12110-2 NM_058174.3MANE Plus ClinicalGENCODE PrimaryGENCODE BasicTSL:5
ENST00000857097.1COL6A2-2153075899aaENSP00000527156.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000968881.1COL6A2-2333016884aaENSP00000638940.1
 
Protein coding
--GENCODE Basic
ENST00000857104.1COL6A2-2221968539aaENSP00000527163.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000436769.5COL6A2-205919180aaENSP00000390418.1
 
Protein coding
C9JH44 -TSL:2CDS 3' incomplete
ENST00000413758.1COL6A2-204750250aaENSP00000395751.1
 
Protein coding
H7C0M5 -TSL:3CDS 5' and 3' incomplete
ENST00000460886.1COL6A2-206306No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000485591.1COL6A2-207777No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 28, Coding exons: 27, Transcript length: 3,445 bps, Translation length: 1,019 residues

MANE

This MANE Select transcript contains ENSP00000300527 and matches to NM_001849.4 and NP_001840.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12110

CCDS

This transcript is a member of the Human CCDS set: CCDS13728

Transcript Support Level (TSL)

TSL:1

Version

ENST00000300527.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.