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Human (GRCh38.p14)
Description

syntaxin 5 [Source:HGNC Symbol;Acc:HGNC:11440]

Gene Synonyms

SED5, STX5A

Location
About this transcript

This transcript has 11 exons, is annotated with 21 domains and features, is associated with 12362 variant alleles and maps to 484 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000294179.8STX5-2011794355aaENSP00000294179.3
 
Protein coding
CCDS8038Q13190-1 NM_003164.5MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000858717.1STX5-2112437355aaENSP00000528776.1
 
Protein coding
CCDS8038--GENCODE BasicAPPRIS P1
ENST00000858719.1STX5-2131881355aaENSP00000528778.1
 
Protein coding
CCDS8038--GENCODE BasicAPPRIS P1
ENST00000858716.1STX5-2101793367aaENSP00000528775.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000377897.8STX5-2021785321aaENSP00000367129.4
 
Protein coding
CCDS58140Q13190-4 -GENCODE BasicTSL:1
ENST00000858718.1STX5-2121738355aaENSP00000528777.1
 
Protein coding
CCDS8038--GENCODE BasicAPPRIS P1
ENST00000858720.1STX5-2141726355aaENSP00000528779.1
 
Protein coding
CCDS8038--GENCODE BasicAPPRIS P1
ENST00000911719.1STX5-2151583297aaENSP00000581778.1
 
Protein coding
--GENCODE Basic
ENST00000394690.5STX5-2031568301aaENSP00000378182.1
 
Protein coding
CCDS81578Q13190-2 -GENCODE BasicTSL:5
ENST00000431400.2STX5-204934228aaENSP00000414289.2
 
Protein coding
H7C3X5 -TSL:2CDS 5' incomplete
ENST00000491231.5STX5-2071719250aaENSP00000432748.1
 
Nonsense mediated decay
E9PNU4 -TSL:5
ENST00000492066.5STX5-208162781aaENSP00000434107.1
 
Nonsense mediated decay
E9PRW9 -TSL:5
ENST00000486437.1STX5-20556078aaENSP00000436495.1
 
Nonsense mediated decay
E9PP18 -TSL:4
ENST00000488303.5STX5-206604No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000677401.1STX5-2091339No protein-
 
Retained intron
---
Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,794 bps, Translation length: 355 residues

MANE

This MANE Select transcript contains ENSP00000294179 and matches to NM_003164.5 and NP_003155.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13190

CCDS

This transcript is a member of the Human CCDS set: CCDS8038

Transcript Support Level (TSL)

TSL:1

Version

ENST00000294179.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.