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Human (GRCh38.p14)
Description

CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]

Gene Synonyms

NLIIF, SCP1

About this transcript

This transcript has 7 exons, is annotated with 34 domains and features, is associated with 4468 variant alleles and maps to 403 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000273062.7CTDSP1-2012525261aaENSP00000273062.2
 
Protein coding
CCDS2416Q9GZU7-1 NM_021198.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P4TSL:1
ENST00000473420.6CTDSP1-2072584120aaENSP00000518508.1
 
Protein coding
A0AA34QVU0 -TSL:3
ENST00000710839.1CTDSP1-2192528120aaENSP00000518518.1
 
Protein coding
A0AA34QVU0 -GENCODE PrimaryGENCODE Basic
ENST00000498160.6CTDSP1-2152524120aaENSP00000518509.1
 
Protein coding
A0AA34QVU0 -TSL:5
ENST00000710837.1CTDSP1-2172359260aaENSP00000518515.1
 
Protein coding
Q9GZU7-2 -GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000710828.1CTDSP1-2162326120aaENSP00000518506.1
 
Protein coding
A0AA34QVU0 -GENCODE Basic
ENST00000452977.6CTDSP1-2052323268aaENSP00000404301.2
 
Protein coding
H7C270 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000491064.6CTDSP1-2102309120aaENSP00000518507.1
 
Protein coding
A0AA34QVU0 -TSL:3
ENST00000488627.6CTDSP1-2091118120aaENSP00000518519.1
 
Protein coding
A0AA34QVU0 -GENCODE BasicTSL:3
ENST00000443891.6CTDSP1-2041109120aaENSP00000392248.2
 
Protein coding
A0AA34QVU0 -GENCODE BasicTSL:3
ENST00000464255.2CTDSP1-206926120aaENSP00000518520.1
 
Protein coding
A0AA34QVU0 -GENCODE BasicTSL:5
ENST00000428361.6CTDSP1-202842120aaENSP00000518517.1
 
Protein coding
A0AA34QVU0 -GENCODE BasicTSL:5
ENST00000710838.1CTDSP1-2182292114aaENSP00000518516.1
 
Nonsense mediated decay
A0AA34QW09 --
ENST00000492545.1CTDSP1-211634No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000431127.2CTDSP1-203586No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000496785.5CTDSP1-213460No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000497677.5CTDSP1-214998No protein-
 
Retained intron
--TSL:2
ENST00000482272.5CTDSP1-208984No protein-
 
Retained intron
--TSL:2
ENST00000494067.5CTDSP1-212362No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,525 bps, Translation length: 261 residues

MANE

This MANE Select transcript contains ENSP00000273062 and matches to NM_021198.3 and NP_067021.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZU7

CCDS

This transcript is a member of the Human CCDS set: CCDS2416

Transcript Support Level (TSL)

TSL:1

Version

ENST00000273062.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.