Human (GRCh38.p14)
Description

superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]

Gene Synonyms

ALS, ALS1, IPOA

Location
About this transcript

This transcript has 5 exons, is annotated with 718 domains and features, is associated with 5046 variant alleles and maps to 344 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000270142.11SOD1-201895154aaENSP00000270142.7
 
Protein coding
CCDS33536P00441 V9HWC9 NM_000454.5MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000877328.1SOD1-205979175aaENSP00000547387.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000928717.1SOD1-210949152aaENSP00000598776.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000928718.1SOD1-211925149aaENSP00000598777.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000877331.1SOD1-208916164aaENSP00000547390.1
 
Protein coding
--GENCODE Basic
ENST00000877330.1SOD1-207889153aaENSP00000547389.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000389995.4SOD1-202865135aaENSP00000374645.4
 
Protein coding
H7BYH4 -GENCODE PrimaryGENCODE BasicTSL:3
ENST00000877329.1SOD1-206848134aaENSP00000547388.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000877332.1SOD1-209782200aaENSP00000547391.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000928719.1SOD1-21267982aaENSP00000598778.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000928720.1SOD1-213620133aaENSP00000598779.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000928721.1SOD1-21443180aaENSP00000598780.1
 
Protein coding
--GENCODE Basic
ENST00000470944.1SOD1-2031746No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000476106.5SOD1-204586No protein-
 
Protein coding CDS not defined
--TSL:5
Statistics

Exons: 5, Coding exons: 5, Transcript length: 895 bps, Translation length: 154 residues

MANE

This MANE Select transcript contains ENSP00000270142 and matches to NM_000454.5 and NP_000445.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00441

CCDS

This transcript is a member of the Human CCDS set: CCDS33536

Transcript Support Level (TSL)

TSL:1

Version

ENST00000270142.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.