Transcript: ENST00000269491.6 SERPINB12-201

Description

serpin family B member 12 [Source:HGNC Symbol;Acc:HGNC:14220]

Location

Chromosome 18: 63,542,369-63,569,329 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 11921 variant alleles and maps to 349 oligo probes.

Gene

This transcript is a product of gene ENSG00000166634.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000382768.2	SERPINB12-202	3738	425aa	ENSP00000372218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS77194	Q96P63-2	NM_001307928.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000269491.6	SERPINB12-201	3678	405aa	ENSP00000269491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11984	Q96P63-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000680447.1	SERPINB12-203	1367	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,678 bps, Translation length: 405 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96P63

CCDS

This transcript is a member of the Human CCDS set: CCDS11984

Transcript Support Level (TSL)

TSL:1

Version

ENST00000269491.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000269491.6 SERPINB12-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000269491.6 SERPINB12-201

Summary

About Us

Get help

Our sister sites

Follow us