Human (GRCh38.p14)
Description

VPS26 retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]

Gene Synonyms

HBETA58, PEP8A, VPS26

Location
About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 21429 variant alleles and maps to 430 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263559.11VPS26A-2014227327aaENSP00000263559.6
 
Protein coding
CCDS7286O75436-1 NM_004896.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000373382.5VPS26A-2023229327aaENSP00000362480.1
 
Protein coding
CCDS7286O75436-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000395098.5VPS26A-2032554251aaENSP00000378532.1
 
Protein coding
CCDS41536O75436-2 -GENCODE basicTSL:5
ENST00000489794.1VPS26A-206928226aaENSP00000474611.1
 
Protein coding
S4R3Q6 -GENCODE basicTSL:3
ENST00000489656.5VPS26A-20581763aaENSP00000473746.1
 
Nonsense mediated decay
S4R2Y3 -TSL:5
ENST00000490696.5VPS26A-207800No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000467852.1VPS26A-204666No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000497564.5VPS26A-209462No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000497022.1VPS26A-208458No protein-
 
Protein coding CDS not defined
--TSL:3
Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,227 bps, Translation length: 327 residues

MANE

This MANE Select transcript contains ENSP00000263559 and matches to NM_004896.5 and NP_004887.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75436

CCDS

This transcript is a member of the Human CCDS set: CCDS7286

Transcript Support Level (TSL)

TSL:1

Version

ENST00000263559.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.