Transcript: ENST00000258317.6 NPL-201

Description

N-acetylneuraminate pyruvate lyase [Source:HGNC Symbol;Acc:HGNC:16781]

Gene Synonyms

C1ORF13, DHDPS1, NPL1

Location

Chromosome 1: 182,794,350-182,830,384 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features and maps to 336 oligo probes.

Gene

This transcript is a product of gene ENSG00000135838.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000367553.6	NPL-203	2543	320aa	ENSP00000356524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	Q9BXD5-1	NM_030769.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00001145668.1	NPL-294	3053	320aa	ENSP00000809260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	Not part of the MANE transcript set but a version of a MANE Select or MANE Plus Clinical transcripts with maximal 3’ and/or 5’ UTR extension.Ensembl Canonical Extended, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000949074.1	NPL-237	4834	276aa	ENSP00000619133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000949079.2	NPL-242	4822	357aa	ENSP00000619138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879508.2	NPL-223	4718	320aa	ENSP00000549567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000949082.2	NPL-245	3748	357aa	ENSP00000619141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879498.2	NPL-213	3670	357aa	ENSP00000549557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879499.2	NPL-214	3508	320aa	ENSP00000549558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000982217.1	NPL-246	3415	230aa	ENSP00000652034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982218.1	NPL-247	3373	267aa	ENSP00000652035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982219.1	NPL-248	3262	230aa	ENSP00000652036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000949075.2	NPL-238	3118	357aa	ENSP00000619134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367554.7	NPL-204	3027	301aa	ENSP00000356525.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55667	Q9BXD5-2	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000879501.2	NPL-216	3011	320aa	ENSP00000549560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000879515.2	NPL-230	3007	357aa	ENSP00000549574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000949076.2	NPL-239	3006	357aa	ENSP00000619135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879500.2	NPL-215	3004	276aa	ENSP00000549559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879502.2	NPL-217	2998	320aa	ENSP00000549561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000879505.2	NPL-220	2983	357aa	ENSP00000549564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010991.1	NPL-272	2944	230aa	ENSP00000680808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879513.2	NPL-228	2901	320aa	ENSP00000549572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000949080.2	NPL-243	2847	357aa	ENSP00000619139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879503.1	NPL-218	2823	357aa	ENSP00000549562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879504.2	NPL-219	2792	276aa	ENSP00000549563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000913310.2	NPL-235	2786	320aa	ENSP00000583369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00001011001.1	NPL-282	2781	284aa	ENSP00000680818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001117472.1	NPL-289	2763	280aa	ENSP00000787277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010997.1	NPL-278	2748	284aa	ENSP00000680814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879506.2	NPL-221	2707	266aa	ENSP00000549565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879516.2	NPL-231	2695	266aa	ENSP00000549575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982226.1	NPL-255	2677	176aa	ENSP00000652043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982223.1	NPL-252	2676	284aa	ENSP00000652040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879511.2	NPL-226	2674	321aa	ENSP00000549570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENST00000367555.6	NPL-205	2671	240aa	ENSP00000356526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55666	Q9BXD5-4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000949078.2	NPL-241	2666	276aa	ENSP00000619137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001011002.1	NPL-283	2665	230aa	ENSP00000680819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000949073.2	NPL-236	2655	188aa	ENSP00000619132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982232.1	NPL-260	2651	230aa	ENSP00000652049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001122592.1	NPL-293	2636	280aa	ENSP00000792397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879507.2	NPL-222	2629	320aa	ENSP00000549566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000879514.2	NPL-229	2629	266aa	ENSP00000549573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010994.1	NPL-275	2621	284aa	ENSP00000680811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001110300.1	NPL-286	2591	315aa	ENSP00000780105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879509.2	NPL-224	2561	242aa	ENSP00000549568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000949077.2	NPL-240	2545	242aa	ENSP00000619136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010987.1	NPL-269	2543	230aa	ENSP00000680804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001110301.1	NPL-287	2535	315aa	ENSP00000780106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879512.2	NPL-227	2509	266aa	ENSP00000549571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001114656.1	NPL-288	2504	230aa	ENSP00000784461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010993.1	NPL-274	2462	284aa	ENSP00000680810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000258317.6	NPL-201	2461	320aa	ENSP00000258317.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	Q9BXD5-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000879510.1	NPL-225	2391	320aa	ENSP00000549569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1350	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3,
ENST00000614468.1	NPL-212	2376	230aa	ENSP00000482415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	A0A087WZ70	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000949081.2	NPL-244	2307	357aa	ENSP00000619140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982221.1	NPL-250	2089	230aa	ENSP00000652038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982220.1	NPL-249	2044	230aa	ENSP00000652037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001010986.1	NPL-268	2033	230aa	ENSP00000680803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879517.2	NPL-232	1912	276aa	ENSP00000549576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982234.1	NPL-262	1845	176aa	ENSP00000652051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879518.2	NPL-233	1665	352aa	ENSP00000549577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000879519.2	NPL-234	1332	242aa	ENSP00000549578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001117473.1	NPL-290	1254	144aa	ENSP00000787278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001117475.1	NPL-292	1237	181aa	ENSP00000787280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00001117474.1	NPL-291	1126	144aa	ENSP00000787279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000982238.1	NPL-266	1033	230aa	ENSP00000652055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72990	-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367552.6	NPL-202	745	240aa	ENSP00000356523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55666	Q9BXD5-4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00001011003.1	NPL-284	4817	118aa	ENSP00000680820.1	Nonsense mediated decay		-	-	-
ENST00000982230.1	NPL-259	4792	51aa	ENSP00000652047.1	Nonsense mediated decay		-	-	-
ENST00000982239.1	NPL-267	3801	77aa	ENSP00000652056.1	Nonsense mediated decay		-	-	-
ENST00000982236.1	NPL-264	3466	77aa	ENSP00000652053.1	Nonsense mediated decay		-	-	-
ENST00000982237.1	NPL-265	2989	118aa	ENSP00000652054.1	Nonsense mediated decay		-	-	-
ENST00000982229.1	NPL-258	2852	77aa	ENSP00000652046.1	Nonsense mediated decay		-	-	-
ENST00001010988.1	NPL-270	2844	77aa	ENSP00000680805.1	Nonsense mediated decay		-	-	-
ENST00001095195.1	NPL-285	2786	77aa	ENSP00000765001.1	Nonsense mediated decay		-	-	-
ENST00001011000.1	NPL-281	2686	77aa	ENSP00000680817.1	Nonsense mediated decay		-	-	-
ENST00001010992.1	NPL-273	2593	204aa	ENSP00000680809.1	Nonsense mediated decay		-	-	-
ENST00000982227.1	NPL-256	2569	118aa	ENSP00000652044.1	Nonsense mediated decay		-	-	-
ENST00000982228.1	NPL-257	2552	51aa	ENSP00000652045.1	Nonsense mediated decay		-	-	-
ENST00001010995.1	NPL-276	2508	118aa	ENSP00000680812.1	Nonsense mediated decay		-	-	-
ENST00000982225.1	NPL-254	2468	51aa	ENSP00000652042.1	Nonsense mediated decay		-	-	-
ENST00000982222.1	NPL-251	2457	51aa	ENSP00000652039.1	Nonsense mediated decay		-	-	-
ENST00001010990.1	NPL-271	2383	80aa	ENSP00000680807.1	Nonsense mediated decay		-	-	-
ENST00000982224.1	NPL-253	2322	51aa	ENSP00000652041.1	Nonsense mediated decay		-	-	-
ENST00001010996.1	NPL-277	2293	104aa	ENSP00000680813.1	Nonsense mediated decay		-	-	-
ENST00001010998.1	NPL-279	2242	204aa	ENSP00000680815.1	Nonsense mediated decay		-	-	-
ENST00001010999.1	NPL-280	2214	80aa	ENSP00000680816.1	Nonsense mediated decay		-	-	-
ENST00000982233.1	NPL-261	1697	118aa	ENSP00000652050.1	Nonsense mediated decay		-	-	-
ENST00000982235.1	NPL-263	1644	221aa	ENSP00000652052.1	Nonsense mediated decay		-	-	-
ENST00000463899.5	NPL-208	2369	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000488424.5	NPL-211	2144	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000460690.5	NPL-207	804	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000479721.5	NPL-210	585	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000471010.1	NPL-209	518	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000460179.1	NPL-206	359	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,461 bps, Translation length: 320 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXD5

CCDS

This transcript is a member of the Human CCDS set: CCDS1350

Transcript Support Level (TSL)

TSL:1

Version

ENST00000258317.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Upcoming Ensembl Platform Transition

Transcript: ENST00000258317.6 NPL-201

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Transcript: ENST00000258317.6 NPL-201

Summary

About Us

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