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Human (GRCh38.p14)
Description

regulatory factor X1 [Source:HGNC Symbol;Acc:HGNC:9982]

Gene Synonyms

EF-C

Location
About this transcript

This transcript has 21 exons, is annotated with 29 domains and features, is associated with 21722 variant alleles and maps to 832 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000254325.9RFX1-2014375979aaENSP00000254325.3
 
Protein coding
CCDS12301P22670 NM_002918.5MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000872114.1RFX1-21147051089aaENSP00000542173.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000872112.1RFX1-2094576979aaENSP00000542171.1
 
Protein coding
CCDS12301--GENCODE BasicAPPRIS P2
ENST00000872111.1RFX1-2084492979aaENSP00000542170.1
 
Protein coding
CCDS12301--GENCODE PrimaryGENCODE BasicAPPRIS P2
ENST00000872117.1RFX1-2144489979aaENSP00000542176.1
 
Protein coding
CCDS12301--GENCODE BasicAPPRIS P2
ENST00000872118.1RFX1-2154489979aaENSP00000542177.1
 
Protein coding
CCDS12301--GENCODE BasicAPPRIS P2
ENST00000872113.1RFX1-2104372978aaENSP00000542172.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000872115.1RFX1-2124336969aaENSP00000542174.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000872116.1RFX1-2134072881aaENSP00000542175.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000588885.1RFX1-204886158aaENSP00000464960.1
 
Protein coding
K7EIZ8 -TSL:3CDS 3' incomplete
ENST00000586913.1RFX1-202440No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000589239.5RFX1-2052122No protein-
 
Retained intron
--TSL:2
ENST00000589760.1RFX1-206848No protein-
 
Retained intron
--TSL:5
ENST00000589937.5RFX1-207540No protein-
 
Retained intron
--TSL:4
ENST00000588520.1RFX1-203241No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,375 bps, Translation length: 979 residues

MANE

This MANE Select transcript contains ENSP00000254325 and matches to NM_002918.5 and NP_002909.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22670

CCDS

This transcript is a member of the Human CCDS set: CCDS12301

Transcript Support Level (TSL)

TSL:1

Version

ENST00000254325.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.