Human (GRCh38.p14)
Description

SPT4 homolog, DSIF elongation factor subunit [Source:HGNC Symbol;Acc:HGNC:11467]

Gene Synonyms

SPT4, SPT4H, SUPT4A, SUPT4H

Location
About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 3255 variant alleles and maps to 388 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000225504.8SUPT4H1-2011488117aaENSP00000225504.3
 
Protein coding
CCDS11606P63272 NM_003168.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000577396.5SUPT4H1-202164376aaENSP00000462100.1
 
Protein coding
D3DTZ5 -GENCODE basicTSL:2
ENST00000581540.5SUPT4H1-207668108aaENSP00000464618.1
 
Protein coding
J3QSB9 -GENCODE basicTSL:2
ENST00000580947.1SUPT4H1-204574117aaENSP00000462670.1
 
Protein coding
CCDS11606P63272 -GENCODE basicAPPRIS P1TSL:4
ENST00000579289.1SUPT4H1-20331842aaENSP00000462602.1
 
Nonsense mediated decay
J3KSQ6 -TSL:3
ENST00000581166.5SUPT4H1-2051401No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000581204.1SUPT4H1-206539No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,488 bps, Translation length: 117 residues

MANE

This MANE Select transcript contains ENSP00000225504 and matches to NM_003168.3 and NP_003159.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63272

CCDS

This transcript is a member of the Human CCDS set: CCDS11606

Transcript Support Level (TSL)

TSL:1

Version

ENST00000225504.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.