Human (GRCh38.p14)
Description

chondroitin polymerizing factor 2 [Source:HGNC Symbol;Acc:HGNC:29270]

Gene Synonyms

CHSY-3, CSGLCA-T, KIAA1402

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 3633 variant alleles and maps to 524 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000035307.7CHPF2-2013989772aaENSP00000035307.2
 
Protein coding
CCDS34779Q9P2E5-1 NM_019015.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000692651.1CHPF2-2102795711aaENSP00000509142.1
 
Protein coding
CCDS94234A0A8I5KRN5 -GENCODE basic
ENST00000495645.5CHPF2-2042709764aaENSP00000418914.1
 
Protein coding
CCDS64803G5E9W2 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000690577.1CHPF2-2082618339aaENSP00000509965.1
 
Protein coding
A0A8I5KSK8 -GENCODE basic
ENST00000482173.6CHPF2-2032382701aaENSP00000419769.2
 
Protein coding
CCDS94233C9JZF7 -GENCODE basicAPPRIS ALT2TSL:4
ENST00000685322.1CHPF2-2052580139aaENSP00000508617.1
 
Nonsense mediated decay
A0A8I5KUJ5 --
ENST00000689322.1CHPF2-2062433345aaENSP00000509595.1
 
Nonsense mediated decay
H7C5L5 --
ENST00000465601.2CHPF2-2021448345aaENSP00000420204.2
 
Nonsense mediated decay
H7C5L5 -TSL:3
ENST00000691224.1CHPF2-2094424No protein-
 
Retained intron
---
ENST00000690444.1CHPF2-2071852No protein-
 
Retained intron
---
Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,989 bps, Translation length: 772 residues

MANE

This MANE Select transcript contains ENSP00000035307 and matches to NM_019015.3 and NP_061888.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P2E5

CCDS

This transcript is a member of the Human CCDS set: CCDS34779

Transcript Support Level (TSL)

TSL:1

Version

ENST00000035307.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.