Transcript: ENSSSCT00000036143.4 OCRL-205

Description

OCRL inositol polyphosphate-5-phosphatase [Source:VGNC Symbol;Acc:VGNC:91014]

Location

Primary_assembly X: 106,135,453-106,190,110 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 23 domains and features, is associated with 1048 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000012650.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000081819.1	OCRL-201	4811	903aa	ENSSSCP00000067945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSN6 A0A8D0TFN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000036143.4	OCRL-205	5207	892aa	ENSSSCP00000030427.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ZGU8 K7GRA1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000077234.2	OCRL-202	5164	900aa	ENSSSCP00000060304.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q822 A0A8D1JU86	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000035468.4	OCRL-204	5141	827aa	ENSSSCP00000030354.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GR29	-
ENSSSCT00000013831.4	OCRL-203	4961	816aa	ENSSSCP00000013449.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ZKM0 F1RTI8	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 5,207 bps, Translation length: 892 residues

Version

ENSSSCT00000036143.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSSSCT00000036143.4 OCRL-205

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSSSCT00000036143.4 OCRL-205

Summary

About Us

Get help

Our sister sites

Follow us