Transcript: ENSSSCT00000034718.5 GABBR1-201

Description

gamma-aminobutyric acid type B receptor subunit 1 [Source:VGNC Symbol;Acc:VGNC:88297]

Location

Primary_assembly 7: 22,548,566-22,572,241 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 25 domains and features and is associated with 857 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000001242.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000067078.3	GABBR1-206	4331	960aa	ENSSSCP00000070651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480I1B8 A0A5G2RH67	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000035175.4	GABBR1-204	4242	960aa	ENSSSCP00000046947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASW6 A0A480I1B8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107095.1	GABBR1-203	3982	844aa	ENSSSCP00000081493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VJP5	-
ENSSSCT00000034718.5	GABBR1-201	3416	733aa	ENSSSCP00000029698.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8X9AER4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSSSCT00000075850.3	GABBR1-207	1972	629aa	ENSSSCP00000061998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QBV3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSSSCT00000098887.2	GABBR1-205	4385	193aa	ENSSSCP00000075891.2	Nonsense mediated decay	F1RYH7	-
ENSSSCT00000033757.5	GABBR1-202	3831	461aa	ENSSSCP00000057419.4	Nonsense mediated decay	A0A480PT90	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,416 bps, Translation length: 733 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSSSCT00000034718.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSSSCT00000034718.5 GABBR1-201

Summary

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Transcript: ENSSSCT00000034718.5 GABBR1-201

Summary

About Us

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