Transcript: ENSSSCT00000033498.4 SAMD4B-201

Description

sterile alpha motif domain containing 4B [Source:VGNC Symbol;Acc:VGNC:98610]

Location

About this transcript

This transcript has 13 exons, is annotated with 25 domains and features, is associated with 509 variant alleles and maps to 9 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000033498.4	SAMD4B-201	3915	827aa	ENSSSCP00000029917.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1VPQ5 K7GPV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000072934.2	SAMD4B-202	4858	693aa	ENSSSCP00000069179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QW52 A0A8D1XLX8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,915 bps, Translation length: 827 residues

Version

ENSSSCT00000033498.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.