Transcript: ENSSSCT00000032017.4 STX12-201

Description

syntaxin 12 [Source:NCBI gene (formerly Entrezgene);Acc:100627750]

Location

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 1415 variant alleles and maps to 35 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000032017.4	STX12-201	3021	369aa	ENSSSCP00000023636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U3K0 I3LHT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000084038.2	STX12-202	3018	368aa	ENSSSCP00000062905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFC9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,021 bps, Translation length: 369 residues

Version

ENSSSCT00000032017.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.