Transcript: ENSSSCT00000031666.4 SIDT1-201

Description

SID1 transmembrane family member 1 [Source:VGNC Symbol;Acc:VGNC:92868]

Location

About this transcript

This transcript has 26 exons, is annotated with 57 domains and features, is associated with 3039 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031666.4	SIDT1-201	5183	828aa	ENSSSCP00000019880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SVA7 I3L776	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000039531.3	SIDT1-202	5269	823aa	ENSSSCP00000036161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWU6 A0A4X1SXD9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,183 bps, Translation length: 828 residues

Version

ENSSSCT00000031666.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.