Transcript: ENSSSCT00000030569.3 ARHGEF16-202

Description

Rho guanine nucleotide exchange factor 16 [Source:VGNC Symbol;Acc:VGNC:85490]

Location

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 633 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030569.3	ARHGEF16-202	2906	701aa	ENSSSCP00000024757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W338 I3LKZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000038247.3	ARHGEF16-201	2642	700aa	ENSSSCP00000045630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANX2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,906 bps, Translation length: 701 residues

Version

ENSSSCT00000030569.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.