Transcript: ENSSSCT00000028499.3 SYNRG-203

Description

synergin gamma [Source:VGNC Symbol;Acc:VGNC:93675]

Location

Primary_assembly 12: 38,975,916-39,069,746 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 34 domains and features, is associated with 3862 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000026596.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000049452.3	SYNRG-202	6227	1315aa	ENSSSCP00000055536.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BG81 A0A4X1T364	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000028499.3	SYNRG-203	6137	1237aa	ENSSSCP00000021499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T245 I3LBS8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000076077.2	SYNRG-204	5753	1109aa	ENSSSCP00000073742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T250 A0A5G2RFT9	-
ENSSSCT00000046617.2	SYNRG-201	4256	1225aa	ENSSSCP00000050458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B2Y3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 6,137 bps, Translation length: 1,237 residues

Version

ENSSSCT00000028499.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSSSCT00000028499.3 SYNRG-203

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Transcript: ENSSSCT00000028499.3 SYNRG-203

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