Transcript: ENSSSCT00000027082.3 PLEKHN1-202

Description

kelch like family member 17 [Source:VGNC Symbol;Acc:VGNC:98487]

Location

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features, is associated with 248 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040850.3	PLEKHN1-201	2558	615aa	ENSSSCP00000038498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A3H3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000027082.3	PLEKHN1-202	2405	564aa	ENSSSCP00000022371.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HLW4 I3LE85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,405 bps, Translation length: 564 residues

Version

ENSSSCT00000027082.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.