Transcript: ENSSSCT00000025861.4 SRGAP1-201

Description

SLIT-ROBO Rho GTPase activating protein 1 [Source:VGNC Symbol;Acc:VGNC:93454]

Location

About this transcript

This transcript has 22 exons, is annotated with 35 domains and features, is associated with 12138 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000062028.3	SRGAP1-202	8970	1079aa	ENSSSCP00000052703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000025861.4	SRGAP1-201	6854	1056aa	ENSSSCP00000021496.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LBS5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 6,854 bps, Translation length: 1,056 residues

Version

ENSSSCT00000025861.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.