Transcript: ENSSSCT00000024815.3 CATSPER4-202

Description

cation channel sperm associated 4 [Source:VGNC Symbol;Acc:VGNC:86212]

Location

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features and is associated with 967 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024815.3	CATSPER4-202	1818	471aa	ENSSSCP00000028118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0S8H7 I3LVG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000101585.1	CATSPER4-201	1798	449aa	ENSSSCP00000077440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FDF3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,818 bps, Translation length: 471 residues

Version

ENSSSCT00000024815.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 2.