Transcript: ENSSSCT00000022959.3 DNAJC9-201

Description

DnaJ heat shock protein family (Hsp40) member C9 [Source:VGNC Symbol;Acc:VGNC:96681]

Location

About this transcript

This transcript has 8 exons, is annotated with 21 domains and features, is associated with 204 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031242.4	DNAJC9-202	4535	304aa	ENSSSCP00000026705.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T687 I3LRH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000022959.3	DNAJC9-201	3081	260aa	ENSSSCP00000024116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T3C2 F1SU72	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 3,081 bps, Translation length: 260 residues

Version

ENSSSCT00000022959.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.