Transcript: ENSSSCT00000019070.6 SP2-202

Description

Sp2 transcription factor [Source:VGNC Symbol;Acc:VGNC:93361]

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 1250 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000019070.6	SP2-202	3130	612aa	ENSSSCP00000018564.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RWJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000091899.2	SP2-201	3027	612aa	ENSSSCP00000075121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F796	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,130 bps, Translation length: 612 residues

Version

ENSSSCT00000019070.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Frameshift introns

Frameshift introns occur at intron number(s) 4.