Transcript: ENSSSCT00000018228.4 NPC1L1-205

Description

NPC1 like intracellular cholesterol transporter 1 [Source:VGNC Symbol;Acc:VGNC:90842]

Location

Primary_assembly 18: 50,726,922-50,757,649 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features and is associated with 1737 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000016746.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000018228.4	NPC1L1-205	7627	1332aa	ENSSSCP00000017736.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UC92 F1SSH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000088341.1	NPC1L1-206	7489	1286aa	ENSSSCP00000069617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UFA4 A0A5G2QXL8	-
ENSSSCT00000085914.2	NPC1L1-203	7355	1292aa	ENSSSCP00000073628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8N3	-
ENSSSCT00000102175.1	NPC1L1-204	7355	1292aa	ENSSSCP00000079260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FK35	-
ENSSSCT00000078642.2	NPC1L1-202	2330	725aa	ENSSSCP00000073588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UCA7 A0A5G2R8J1	-
ENSSSCT00000103845.1	NPC1L1-201	2178	725aa	ENSSSCP00000076242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAD8	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 7,627 bps, Translation length: 1,332 residues

Version

ENSSSCT00000018228.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000018228.4 NPC1L1-205

Summary

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Transcript: ENSSSCT00000018228.4 NPC1L1-205

Summary

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