Transcript: ENSSSCT00000017183.5 IRF2-203

Description

interferon regulatory factor 2 [Source:VGNC Symbol;Acc:VGNC:96375]

Location

Primary_assembly 15: 45,547,184-45,634,704 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 4514 variant alleles and maps to 23 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000015782.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039049.3	IRF2-204	2359	380aa	ENSSSCP00000046206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000035483.3	IRF2-201	3009	349aa	ENSSSCP00000028386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VW94 K7GKU5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000032886.3	IRF2-202	3009	349aa	ENSSSCP00000028473.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VW94 K7GKU5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000017183.5	IRF2-203	3007	347aa	ENSSSCP00000016722.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1P6L6 A0A8D1XAR6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 3,007 bps, Translation length: 347 residues

Version

ENSSSCT00000017183.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSSSCT00000017183.5 IRF2-203

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Transcript: ENSSSCT00000017183.5 IRF2-203

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