Transcript: ENSSSCT00000016434.4 APOA4-201

Description

apolipoprotein A4 [Source:NCBI gene (formerly Entrezgene);Acc:397681]

Location

About this transcript

This transcript has 4 exons, is annotated with 21 domains and features, is associated with 551 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061852.2	APOA4-202	1517	392aa	ENSSSCP00000057231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BM29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000016434.4	APOA4-201	1388	389aa	ENSSSCP00000015992.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SJT7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,388 bps, Translation length: 389 residues

Version

ENSSSCT00000016434.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.